nf-core_modules/tests/software/fasttree/main.nf
Anthony Underwood be390a25e5
adding fasttree module (#412)
* adding fasttree module

* correct trailing whitespace

* using sarscov2 as a test dir

* remove TODO

* update test data naming

* further test data naming updates

* remove options in favour of $options.args

* ensure non standard exit codes don't cause an issue

* update md5sum
2021-04-08 18:15:23 +01:00

12 lines
303 B
Text

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { FASTTREE } from '../../../software/fasttree/main.nf' addParams( options: [:] )
workflow test_fasttree {
input = [ file(params.test_data['sarscov2']['genome']['informative_sites_fas'], checkIfExists: true) ]
FASTTREE ( input )
}