nf-core_modules/tests/software/fasttree/test.yml at 1f465a63d0aebe10b8a583ec1231e6761acd62d9 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

Anthony Underwood be390a25e5

adding fasttree module (#412 )

* adding fasttree module

* correct trailing whitespace

* using sarscov2 as a test dir

* remove TODO

* update test data naming

* further test data naming updates

* remove options in favour of $options.args

* ensure non standard exit codes don't cause an issue

* update md5sum

2021-04-08 18:15:23 +01:00

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 - name: fasttree
   command: nextflow run ./tests/software/fasttree -entry test_fasttree -c tests/config/nextflow.config
   tags:
     - fasttree
   files:
     - path: output/fasttree/fasttree_phylogeny.tre
       md5sum: 63a886117535847c1e66fa4487f3b7d2