nf-core_modules/tests/software/gatk4/applybqsr/test.yml
yocra3 614d61dc13
Add gatk4/applybqsr (#331)
* Add applybqsr module

* Solve problem in functions.nf

* Add to pytest
2021-03-23 14:15:26 +01:00

18 lines
598 B
YAML

- name: gatk4 applybqsr test_gatk4_applybqsr
command: nextflow run tests/software/gatk4/applybqsr -entry test_gatk4_applybqsr -c tests/config/nextflow.config
tags:
- gatk4
- gatk4_applybqsr
files:
- path: output/gatk4/test.bam
md5sum: 943a43de5f575a0435fe13072cbc15c8
- name: "\e[3~"
command: nextflow run tests/software/gatk4/applybqsr -entry test_gatk4_applybqsr_intervals -c tests/config/nextflow.config
tags:
- gatk4
- gatk4_applybqsr_intervals
- gatk4_applybqsr
files:
- path: output/gatk4/test.bam
md5sum: a92238a9a78da48bf437fd5b7d9790a3