nf-core_modules/modules/nanolyse/meta.yml

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YAML

name: nanolyse
description: DNA contaminant removal using NanoLyse
keywords:
- contaminant_removal
tools:
- nanolyse:
description: |
DNA contaminant removal using NanoLyse
homepage: https://github.com/wdecoster/nanolyse
documentation: https://github.com/wdecoster/nanolyse#nanolyse
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fastq:
type: file
description: |
Basecalled reads in FASTQ.GZ format
pattern: "*.fastq.gz"
- fasta:
type: file
description: |
A reference fasta file against which to filter.
pattern: "*.fasta"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fastq:
type: file
description: Reads with contaminants removed in FASTQ format
pattern: "*.fastq.gz"
- log:
type: file
description: Log of the Nanolyse run.
pattern: "*.log"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@yuukiiwa"