nf-core_modules/tests/software/samtools/view/test.yml at 394273f173d6f5662bf4370c2dfa2a2af73b48a6 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

Edmund Miller a3684d9594

Lint modules ci (#389 )

* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2021-04-08 09:10:52 +01:00

8 lines

269 B

YAML

Raw Blame History

 - name: samtools view
   command: nextflow run tests/software/samtools/view -entry test_samtools_view -c tests/config/nextflow.config
   tags:
     - samtools
     - samtools/view
   files:
     - path: output/samtools/test.bam
       md5sum: 8fb1e82f76416e9e30fc6b2357e2cf13