mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
889465cb2b
* update test data paths * Update test md5sums * gatk test fixes & update variantfiltration main * few extra fixes after review * fix suspected format error * Update software/gatk4/variantfiltration/main.nf * Update software/gatk4/variantfiltration/main.nf * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
18 lines
761 B
YAML
18 lines
761 B
YAML
- name: bcftools isec test_bcftools_isec
|
|
command: nextflow run tests/software/bcftools/isec -entry test_bcftools_isec -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_isec
|
|
files:
|
|
- path: output/bcftools/test/0000.vcf.gz
|
|
md5sum: fc178eb342a91dc0d1d568601ad8f8e2
|
|
- path: output/bcftools/test/0001.vcf.gz.tbi
|
|
md5sum: 36e11bf96ed0af4a92caa91a68612d64
|
|
- path: output/bcftools/test/sites.txt
|
|
md5sum: 1cea3fbde7f6d3c97f3d39036f9690df
|
|
- path: output/bcftools/test/0000.vcf.gz.tbi
|
|
md5sum: 36e11bf96ed0af4a92caa91a68612d64
|
|
- path: output/bcftools/test/0001.vcf.gz
|
|
md5sum: fc178eb342a91dc0d1d568601ad8f8e2
|
|
- path: output/bcftools/test/README.txt
|
|
md5sum: 10fc33b66522645600d44afbd41fb792
|