nf-core_modules/tests/software/bismark/genomepreparation/main.nf
Kevin Menden 6973df628f
Fixing vcftools and bismark tests (#383)
* fixed vcftools

* fixed genomepreparation, methylationextractor

* fixed deduplicate
2021-03-25 09:12:08 +00:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { BISMARK_GENOMEPREPARATION } from '../../../../software/bismark/genomepreparation/main.nf' addParams( options: [:] )
workflow test_bismark_genomepreparation {
fasta = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
BISMARK_GENOMEPREPARATION ( fasta )
}