mirror of
https://github.com/MillironX/nf-core_modules.git
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043a7d1e3c
* remove deprecated test tags * fix bowtie, gatk4/applybsqr * fix gatk4 baserecalibrator * fixed shovill * fixed yara/mapper * fixed kallistobustools/ref paths
21 lines
733 B
YAML
21 lines
733 B
YAML
- name: unicycler single-end
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command: nextflow run ./tests/software/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
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tags:
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- unicycler
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files:
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- path: output/unicycler/test.scaffolds.fa
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- path: output/unicycler/test.assembly.gfa
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- path: output/unicycler/test.unicycler.log
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contains:
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- "Assembly complete"
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- name: unicycler paired-end
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command: nextflow run ./tests/software/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
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tags:
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- unicycler
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files:
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- path: output/unicycler/test.scaffolds.fa
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- path: output/unicycler/test.assembly.gfa
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- path: output/unicycler/test.unicycler.log
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contains:
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- "Assembly complete"
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