mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
6243c3792c
* Add stubs for deepvariant [ci skip] * Update the stubs for deepvariant [ci skip] * functional with google docker image * cleanup * consume docker container within singularity executor * update the meta.yml file and ask for review * tweak the input channel shape and test data * tweak input data [ci skip] * update for the new syntax * remove the functions and rename meta vars * Update the arguments mechanism * update chr, region and checksum Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Maxime U. Garcia <max.u.garcia@gmail.com> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
9 lines
353 B
YAML
9 lines
353 B
YAML
- name: deepvariant
|
|
command: nextflow run ./tests/modules/deepvariant -entry test_deepvariant -c tests/config/nextflow.config
|
|
tags:
|
|
- deepvariant
|
|
files:
|
|
- path: output/deepvariant/test_out.vcf.gz
|
|
md5sum: 66d86be7a9bafe1f5c6304ebee18ee20
|
|
- path: output/deepvariant/test_out.g.vcf.gz
|
|
md5sum: 4ca868f0a4fdb17a280c3ed083d228e0
|