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34 lines
1.1 KiB
YAML
34 lines
1.1 KiB
YAML
- name: freebayes test_freebayes
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command: nextflow run tests/modules/freebayes -entry test_freebayes -c tests/config/nextflow.config
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tags:
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- freebayes
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files:
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- path: output/freebayes/test.vcf.gz
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- name: freebayes test_freebayes_bed
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command: nextflow run tests/modules/freebayes -entry test_freebayes_bed -c tests/config/nextflow.config
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tags:
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- freebayes
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files:
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- path: output/freebayes/test.vcf.gz
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- name: freebayes test_freebayes_cram
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command: nextflow run tests/modules/freebayes -entry test_freebayes_cram -c tests/config/nextflow.config
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tags:
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- freebayes
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files:
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- path: output/freebayes/test.vcf.gz
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- name: freebayes test_freebayes_somatic
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command: nextflow run tests/modules/freebayes -entry test_freebayes_somatic -c tests/config/nextflow.config
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tags:
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- freebayes
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files:
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- path: output/freebayes/test.vcf.gz
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- name: freebayes test_freebayes_somatic_cram_intervals
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command: nextflow run tests/modules/freebayes -entry test_freebayes_somatic_cram_intervals -c tests/config/nextflow.config
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tags:
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- freebayes
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files:
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- path: output/freebayes/test.vcf.gz
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