nf-core_modules/tests/modules/porechop/test.yml at 632587a7fcf6c1d7d71b21560f60f1d4802e5d0e - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-21 07:42:05 +00:00

Gisela Gabernet 0b0f87c2f7

add porechop module (#914 )

* add module main porechop

* update porechop main

* add porechop functions

* update meta porechop

* add test main porechop

* add porechop pytest yml

* add porechop test.yml

* Update modules/porechop/meta.yml

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>

* re-add porechop avoid conflict

* Update modules/porechop/meta.yml

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>

* fix prefix suffix

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>

2021-10-28 13:21:36 +02:00

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 - name: porechop test_porechop
   command: nextflow run tests/modules/porechop -entry test_porechop -c tests/config/nextflow.config
   tags:
     - porechop
   files:
     - path: output/porechop/test_porechop.fastq.gz
       md5sum: 08f314ae9f162c8dcc27e5b513d2064d