mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 05:13:09 +00:00
70daf8be30
This commit provides a minor refactoring with som
Nextflow code style improvments:
- Replaces `.toGiga()` with `.giga`
- Replaces `tag { foo }` with `tag "$foo"`
- Move publishDir before input declarations. Directives should be
before the first input. Tho this is not enforced, it may be in
future versions.
- Replaces input `file` with `path`
- Remove unnecessary parentheses
16 lines
224 B
Text
16 lines
224 B
Text
process htslib_tabix {
|
|
tag "$vcf"
|
|
|
|
container 'quay.io/biocontainers/tabix:0.2.6--ha92aebf_0'
|
|
|
|
input:
|
|
path vcf
|
|
|
|
output:
|
|
path "${vcf}.tbi"
|
|
|
|
script:
|
|
"""
|
|
tabix -p vcf ${vcf}
|
|
"""
|
|
}
|