mirror of
https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
32 lines
1.4 KiB
YAML
32 lines
1.4 KiB
YAML
- name: gatk4 getpileupsummaries test_gatk4_getpileupsummaries_just_variants
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command: nextflow run tests/modules/gatk4/getpileupsummaries -entry test_gatk4_getpileupsummaries_just_variants -c tests/config/nextflow.config
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tags:
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- gatk4/getpileupsummaries
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- gatk4
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files:
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- path: output/gatk4/test.pileups.table
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md5sum: 8e0ca6f66e112bd2f7ec1d31a2d62469
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- path: output/gatk4/versions.yml
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md5sum: 059123619f3ed8d4cd178c4390b81e69
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- name: gatk4 getpileupsummaries test_gatk4_getpileupsummaries_separate_sites
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command: nextflow run tests/modules/gatk4/getpileupsummaries -entry test_gatk4_getpileupsummaries_separate_sites -c tests/config/nextflow.config
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tags:
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- gatk4/getpileupsummaries
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- gatk4
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files:
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- path: output/gatk4/test.pileups.table
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md5sum: 8e0ca6f66e112bd2f7ec1d31a2d62469
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- path: output/gatk4/versions.yml
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md5sum: 76b5388b0c5b5762d8d33e34b23f181d
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- name: gatk4 getpileupsummaries test_gatk4_getpileupsummaries_separate_sites_cram
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command: nextflow run tests/modules/gatk4/getpileupsummaries -entry test_gatk4_getpileupsummaries_separate_sites_cram -c tests/config/nextflow.config
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tags:
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- gatk4/getpileupsummaries
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- gatk4
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files:
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- path: output/gatk4/test.pileups.table
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md5sum: 8e0ca6f66e112bd2f7ec1d31a2d62469
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- path: output/gatk4/versions.yml
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md5sum: 2fa51319c2b1d678ee00ab09512cf268
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