mirror of
https://github.com/MillironX/nf-core_modules.git
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a69faefee8
* Added seqtk/rename module and tests code * Updated files and testing code for seqtk rename * Added meta map to seqtk/rename module def * updated prefix parameter usage * updated test.yml to remove local filepaths --> change to output * Added empty line to main.nf
19 lines
561 B
Text
19 lines
561 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { SEQTK_RENAME } from '../../../../modules/seqtk/rename/main.nf'
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workflow test_seqtk_rename {
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input = [ [ id:'test' ], // meta map
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[ file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
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]
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SEQTK_RENAME ( input )
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}
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workflow test_seqtk_rename_fq {
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input = [ [ id:'test' ], // meta map
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[ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true) ]
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]
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SEQTK_RENAME ( input )
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}
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