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26 lines
1.1 KiB
YAML
26 lines
1.1 KiB
YAML
- name: gatk4 reblockgvcf test_gatk4_reblockgvcf
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command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
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tags:
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- gatk4/reblockgvcf
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- gatk4
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files:
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- path: output/gatk4/test.reblock.g.vcf.gz
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- path: output/gatk4/test.reblock.g.vcf.gz.tbi
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- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_intervals
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command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_intervals -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
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tags:
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- gatk4/reblockgvcf
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- gatk4
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files:
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- path: output/gatk4/test.reblock.g.vcf.gz
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- path: output/gatk4/test.reblock.g.vcf.gz.tbi
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- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_dbsnp
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command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_dbsnp -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
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tags:
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- gatk4/reblockgvcf
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- gatk4
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files:
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- path: output/gatk4/test.reblock.g.vcf.gz
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- path: output/gatk4/test.reblock.g.vcf.gz.tbi
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