mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 03:28:17 +00:00
17 lines
357 B
Text
17 lines
357 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.preview.dsl = 2
|
|
|
|
// import shovill
|
|
include {shovill} from '../main.nf' params(params)
|
|
|
|
// define input channel
|
|
readsPath = '../../../test-datasets/tools/shovill/input/SRR3609257_{1,2}.fastq.gz'
|
|
Channel
|
|
.fromFilePairs( "${readsPath}", flat: true )
|
|
.set{ ch_reads }
|
|
|
|
// main workflow
|
|
workflow {
|
|
shovill(ch_reads)
|
|
}
|