nf-core_modules/tests/modules/bcftools
nvnieuwk 8d4373b4e8
added bcftools convert (#1906)
* added bcftools convert

* Update modules/bcftools/convert/main.nf

Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>

* updated test.yml

* Update modules/bcftools/convert/main.nf

Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>

* added automatic output type detection

* linting

* removed a trailing whitespace

Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-07-19 15:09:40 +02:00
..
annotate Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
concat Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
consensus Remove bcftools and ivar module customisations (#1217) 2022-01-18 16:04:56 +00:00
convert added bcftools convert (#1906) 2022-07-19 15:09:40 +02:00
filter Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
index Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
isec Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
merge Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
mpileup Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
norm added an optional vcf index to bcftools/norm (#1821) 2022-06-28 16:18:12 +02:00
query Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
reheader Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
roh fix test 2022-06-08 14:48:16 +02:00
sort Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
stats Update bcftools/stats for WES (#1893) 2022-07-15 20:55:59 +02:00
view Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00