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21 lines
767 B
YAML
21 lines
767 B
YAML
- name: gatk4 samtofastq single-end
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command: nextflow run ./tests/software/gatk4/samtofastq -entry test_gatk4_samtofastq_single_end -c tests/config/nextflow.config
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tags:
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- gatk4
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- gatk4_samtofastq
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- gatk4_samtofastq_single_end
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files:
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- path: output/gatk4/test.fastq.gz
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md5sum: 61c6d3556ac6e0d09d800415b9a48508
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- name: gatk4 samtofastq paired-end
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command: nextflow run ./tests/software/gatk4/samtofastq -entry test_gatk4_samtofastq_paired_end -c tests/config/nextflow.config
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tags:
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- gatk4
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- gatk4_samtofastq
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- gatk4_samtofastq_paired_end
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files:
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- path: output/gatk4/test_1.fastq.gz
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md5sum: 61c6d3556ac6e0d09d800415b9a48508
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- path: output/gatk4/test_2.fastq.gz
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md5sum: d0e74ab8dccca91c0ccd7125e588d5cd
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