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70daf8be30
This commit provides a minor refactoring with som
Nextflow code style improvments:
- Replaces `.toGiga()` with `.giga`
- Replaces `tag { foo }` with `tag "$foo"`
- Move publishDir before input declarations. Directives should be
before the first input. Tho this is not enforced, it may be in
future versions.
- Replaces input `file` with `path`
- Remove unnecessary parentheses
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| .. | ||
| bowtie2 | ||
| bwa | ||
| cutadapt | ||
| fastq_screen | ||
| fastqc | ||
| gatk/dict | ||
| hisat2 | ||
| htslib/tabix | ||
| multiqc | ||
| samtools | ||
| shovill | ||
| tcoffee | ||
| trim_galore | ||
| umi_tools | ||