Harshil Patel bb90e4fb78 Remove bcftools and ivar module customisations (#1217) ... * Remove customisation from bcftools modules * Add save_mpileup option to bcftools/mpileup * Remove params.save_mpileup from ivar/consensus * Update meta.ymls		2022-01-18 16:04:56 +00:00
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concat	Bump software versions for viralrecon modules (#1198)	2022-01-07 17:52:39 +00:00
consensus	Remove bcftools and ivar module customisations (#1217)	2022-01-18 16:04:56 +00:00
filter	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
index	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
isec	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
merge	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
mpileup	Remove bcftools and ivar module customisations (#1217)	2022-01-18 16:04:56 +00:00
norm	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
query	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
reheader	Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110)	2021-12-02 12:39:55 +00:00
sort	Bcftools sort new syntax (#1169)	2022-01-05 12:15:54 +01:00
stats	Bump software versions for viralrecon modules (#1198)	2022-01-07 17:52:39 +00:00
view	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00