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nf-core_modules/software
2021-02-03 09:19:46 +00:00
..
bowtie bowtie - add build to conda definition 2021-02-03 08:49:18 +00:00
bowtie2 bowtie2 build - add build to conda definition 2021-02-03 09:16:10 +00:00
bwa bwa index - add build to conda definition 2021-02-03 09:16:22 +00:00
cutadapt cutadapt - add build to conda definition 2021-02-03 09:16:33 +00:00
deeptools deeptools - add build to conda definition 2021-02-03 09:16:59 +00:00
dsh various - add build to conda definition 2021-02-03 09:19:46 +00:00
fastp various - add build to conda definition 2021-02-03 09:19:46 +00:00
fastqc various - add build to conda definition 2021-02-03 09:19:46 +00:00
gffread various - add build to conda definition 2021-02-03 09:19:46 +00:00
hisat2 various - add build to conda definition 2021-02-03 09:19:46 +00:00
homer/annotatepeaks various - add build to conda definition 2021-02-03 09:19:46 +00:00
lib style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
macs2/callpeak various - add build to conda definition 2021-02-03 09:19:46 +00:00
multiqc various - add build to conda definition 2021-02-03 09:19:46 +00:00
pangolin various - add build to conda definition 2021-02-03 09:19:46 +00:00
phantompeakqualtools various - add build to conda definition 2021-02-03 09:19:46 +00:00
picard picard - add build to conda definition 2021-02-03 09:18:37 +00:00
preseq/lcextrap various - add build to conda definition 2021-02-03 09:19:46 +00:00
qualimap/rnaseq style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
quast Update software/quast/meta.yml 2021-02-01 14:03:36 +01:00
rsem style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
rseqc rseqc - add build to conda definition 2021-02-03 09:18:20 +00:00
salmon Apply suggestions from code review 2021-01-29 12:40:15 +01:00
samtools samtools - add build to conda definition 2021-02-03 09:17:38 +00:00
seacr/callpeak seacr | updated whitespace 2021-01-05 10:22:37 +00:00
SOFTWARE/TOOL style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
sortmerna style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
star added optional output files 2021-01-26 13:31:30 +01:00
stringtie style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
subread/featurecounts style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
trimgalore style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
ucsc/bedgraphtobigwig style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
umitools style(): Fix editorconfig errors 2020-12-17 17:50:24 -06:00