nf-core_modules/modules/bcftools
nvnieuwk 8656636f0d
update for bcftools merge (#1908)
* update for bcftools merge

* Update modules/bcftools/merge/main.nf

Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>

* Update modules/bcftools/merge/main.nf

Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>

* updated test.yml

* added the bed file to the main input tuple

* merged all output into one output channel

* added a test for bcf.gz output

* Update modules/bcftools/merge/main.nf

Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>

* updated the tests

Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-07-20 11:22:51 +02:00
..
annotate Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
concat Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
consensus Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
convert update for bcftools merge (#1908) 2022-07-20 11:22:51 +02:00
filter Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
index Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
isec Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
merge update for bcftools merge (#1908) 2022-07-20 11:22:51 +02:00
mpileup Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
norm Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
query Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
reheader Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
roh fix test 2022-06-08 14:48:16 +02:00
sort Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00
stats Update bcftools/stats for WES (#1893) 2022-07-15 20:55:59 +02:00
view Bump tool versions for modules required in viralrecon (#1859) 2022-07-07 14:48:04 +01:00