nf-core_modules/tests/modules/samtools/fixmate/test.yml at e687c4b97faedfdef5ccc64f7542b6f539d8fbd8 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-25 20:08:17 +00:00

Simon Pearce 81d65d4978

Samtools fixmate module (#991 )

* Samtools fixmate module

* Update modules/samtools/fixmate/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/samtools/fixmate/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update main.nf

* Update modules/samtools/fixmate/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update meta.yml

Co-authored-by: Simon Pearce <simon.pearce@cruk.manchester.ac.uk>
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

2021-11-01 12:12:14 +00:00

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YAML

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 - name: samtools fixmate test_samtools_fixmate
   command: nextflow run tests/modules/samtools/fixmate -entry test_samtools_fixmate -c tests/config/nextflow.config
   tags:
     - samtools/fixmate
     - samtools
   files:
     - path: output/samtools/test.bam
       md5sum: 92c8463710cdcaef2010aa02ed9e01fd