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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
17 lines
605 B
YAML
17 lines
605 B
YAML
- name: gatk4 mergevcfs test_gatk4_mergevcfs
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command: nextflow run tests/modules/gatk4/mergevcfs -entry test_gatk4_mergevcfs -c tests/config/nextflow.config
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tags:
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- gatk4/mergevcfs
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- gatk4
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files:
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- path: output/gatk4/test.vcf.gz
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md5sum: ff48f175e26db2d4b2957762f6d1c715
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- name: gatk4 mergevcfs test_gatk4_mergevcfs_refdict
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command: nextflow run tests/modules/gatk4/mergevcfs -entry test_gatk4_mergevcfs_refdict -c tests/config/nextflow.config
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tags:
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- gatk4/mergevcfs
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- gatk4
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files:
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- path: output/gatk4/test.vcf.gz
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md5sum: ff48f175e26db2d4b2957762f6d1c715
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