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nf-core_modules/software
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Maxime Garcia ea6fde0193
Merge pull request #252 from MaxUlysse/master_tiddit 
New module: tiddit
2021-02-25 09:34:33 +01:00
..
bandage/image Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bcftools Add label to bcftools processes 2021-02-24 09:47:54 +01:00
bedtools Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bismark add bismark/deduplicate + tests 2021-02-23 18:02:16 +01:00
blast Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bowtie Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bowtie2 Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bwa Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bwamem2 Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
bwameth bwameth/align: fix fasta name retrieval 2021-02-20 13:12:43 +01:00
cat/fastq @kevinmenden sanity fix 2021-02-16 23:58:52 +00:00
cutadapt Fix conda version declaration 2021-02-24 15:52:25 +01:00
deeptools Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
dsh Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
fastp Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
fastqc Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
gatk/createsequencedictionary Update software/gatk/createsequencedictionary/main.nf 2021-02-16 22:08:11 +00:00
gatk4 added gatk4 revertsam 2021-02-22 15:21:39 +01:00
gffread Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
gunzip Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
hisat2 Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
homer/annotatepeaks Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
ivar Add missing docs 2021-02-24 12:54:45 +00:00
lib style(#77): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
macs2/callpeak Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
methyldackel add methyldackel/mbias + tests 2021-02-17 19:27:57 +01:00
minimap2/align Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
mosdepth Update software/mosdepth/main.nf 2021-02-15 22:49:53 +00:00
multiqc Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
pangolin Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
phantompeakqualtools Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
picard Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
preseq/lcextrap Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
qualimap qualimap/bamqc: remove unneeded variable definition 2021-02-18 10:00:49 +01:00
quast Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
rsem Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
rseqc Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
salmon Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
samtools faidx: add process label 2021-02-17 16:56:45 +01:00
seacr/callpeak Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
seqkit/split2 remove todos, describe in/output 2021-02-23 15:41:11 +01:00
seqwish/induce Add module for seqwish/induce 2021-02-17 11:19:47 -06:00
sortmerna Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
star Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
stringtie Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
subread/featurecounts Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
tabix Merge pull request #180 from MaxUlysse/master_tabix_bgzip 2021-02-16 23:32:23 +00:00
tiddit/sv feat: add tiddit_sv module 2021-02-24 15:59:10 +01:00
TOOL/SUBTOOL Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
trimgalore Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
ucsc/bedgraphtobigwig Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
umitools Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
untar Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00