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20 lines
781 B
YAML
20 lines
781 B
YAML
- name: Run fastqc single-end test workflow
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command: nextflow run ./software/fastqc/test/ -profile docker -entry test_single_end
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tags:
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- fastqc
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files:
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- path: output/test_single_end/test_fastqc.html
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md5sum: d4d3d600c8dc4024c05b531c2920659a
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- path: output/test_single_end/test_fastqc.zip
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- name: Run fastqc paired-end test workflow
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command: nextflow run ./software/fastqc/test/ -profile docker -entry test_paired_end
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tags:
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- fastqc
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files:
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- path: output/test_paired_end/test_1_fastqc.html
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md5sum: fb13b04d87d4f8b5078c0d92f6ef2d06
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- path: output/test_paired_end/test_2_fastqc.html
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md5sum: d1e3f410e15df9612dc2c17e39f5253d
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- path: output/test_paired_end/test_1_fastqc.zip
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- path: output/test_paired_end/test_2_fastqc.zip
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