mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
32 lines
1.7 KiB
YAML
32 lines
1.7 KiB
YAML
- name: gatk4 reblockgvcf test_gatk4_reblockgvcf
|
|
command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
|
|
tags:
|
|
- gatk4/reblockgvcf
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.reblock.g.vcf.gz
|
|
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
|
|
- path: output/gatk4/test.reblock.g.vcf.gz.tbi
|
|
md5sum: e1aab7d826a151828fd0671ec5aed2e0
|
|
|
|
- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_intervals
|
|
command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_intervals -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
|
|
tags:
|
|
- gatk4/reblockgvcf
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.reblock.g.vcf.gz
|
|
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
|
|
- path: output/gatk4/test.reblock.g.vcf.gz.tbi
|
|
md5sum: e7ca7e9fe76ce12198fd54ec9a64fad4
|
|
|
|
- name: gatk4 reblockgvcf test_gatk4_reblockgvcf_dbsnp
|
|
command: nextflow run ./tests/modules/gatk4/reblockgvcf -entry test_gatk4_reblockgvcf_dbsnp -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/reblockgvcf/nextflow.config
|
|
tags:
|
|
- gatk4/reblockgvcf
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.reblock.g.vcf.gz
|
|
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
|
|
- path: output/gatk4/test.reblock.g.vcf.gz.tbi
|
|
md5sum: 017edea27a253eb51cc4505d00dcb295
|