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<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Mahwash Jamy - MillironX</title><link href="/styles/mix-twbs.min.css" rel=stylesheet></head><body><div class=container-fluid><div class="row wrapper min-vh-100 flex-column flex-sm-row"><aside class="col-12 col-md-3 p-0 bg-dark flex-shrink-1"><nav class="navbar navbar-expand-md navbar-dark bg-dark align-items-start flex-md-column flex-row"><div class=container-fluid><a class="navbar-brand d-block d-md-none" href=#><object class="d-inline-block align-text-top" width=80 height=24 style=filter:invert(100%) data=/graphics/millironx.svg>
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<span class="font-small-caps font-serif">Milliron X</span></a>
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  Milliron X</h1></header></div><div class=blurred-container><div class=motto><h1 id=motto>Mahwash Jamy</h1></div><div class=img-src style=background-image:url(/images/saddles.jpg)></div><div class="img-src blur" style=background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_filter_6742909828560968691.jpg)></div></div><br><section class="container-fluid list-main"><div class="container px-5"></div><div class=row data-masonry='{"percentPosition": true}'><div class="col-xl-6 mb-4"><div class=card><div class=category-button><a href=/categories/paper/ class="btn btn-dark btn-sm" data-bs-toggle=tooltip title=Paper><i class="fad fa-book fa-fw"></i></a></div><div class=card-body><a href=https://doi.org/10.1101/2023.10.20.563221><h3 class=card-title>nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling</h3></a><div>23 Oct 2023</div><a href=/people/sofia-stamouli/ class="icon-link card-link"><i class="fad fa-user"></i> Sofia Stamouli</a>
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<a href=/people/moritz-e.-beber/ class="icon-link card-link"><i class="fad fa-user"></i> Moritz E. Beber</a>
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<a href=/people/tanja-normark/ class="icon-link card-link"><i class="fad fa-user"></i> Tanja Normark</a>
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<a href=/people/thomas-a.-christensen-ii/ class="icon-link card-link
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fw-bolder"><i class="fad fa-user"></i> Thomas A. Christensen II</a>
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<a href=/people/lili-andersson-li/ class="icon-link card-link"><i class="fad fa-user"></i> Lili Andersson-Li</a>
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<a href=/people/maxime-borry/ class="icon-link card-link"><i class="fad fa-user"></i> Maxime Borry</a>
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<a href=/people/mahwash-jamy/ class="icon-link card-link"><i class="fad fa-user"></i> Mahwash Jamy</a>
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<a href=/people/nf-core-community/ class="icon-link card-link"><i class="fad fa-user"></i> nf-core community</a>
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<a href=/people/james-a.-fellows-yate/ class="icon-link card-link"><i class="fad fa-user"></i> James A. Fellows Yate</a><p class=card-text>Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline.
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<strong><small><a href=https://doi.org/10.1101/2023.10.20.563221>Read more »</a></small></strong></p></div><div class=card-footer><a href=/tags/genomics/ class="icon-link card-link"><i class="fad fa-tag"></i> genomics</a></div></div></div></div></section><footer class=fixed-bottom><div class="container-fluid footer-contents"><div class="row justify-content-between"><div class="col-3 align-self-center"><img src=/graphics/brandedbull.min.svg height=95rem></div><div class="col-3 align-self-center"><div class="btn-group float-end" role=group aria-label="Other Milliron X sites"><a class="btn btn-outline-primary btn-sm" href=https://video.millironx.com/ data-bs-toggle=tooltip title="Video (Peertube)"><i class="fax fa-peertube fa-fw"></i></a>
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Thomas A. Christensen II is licensed under a
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<a rel=license href=http://creativecommons.org/licenses/by/4.0/>Creative Commons Attribution 4.0 International License</a>.</p><p>All images, unless otherwise noted, are licensed under a
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<a rel=license href=http://creativecommons.org/licenses/by-nd/4.0/>Creative Commons Attribution-NoDerivatives 4.0 International
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and toolkits in building it. I dedicate this space to
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purpose.</p></div><div class="tab-pane fade p-3" id=debug role=tabpanel><dl><dt>draft</dt><dd>false</dd><dt>iscjklanguage</dt><dd>false</dd><dt>title</dt><dd>Mahwash Jamy</dd></dl></div></div></div></div></div></div></body></html> |