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<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Sofia Stamouli on MillironX</title><link>https://millironx.com/people/sofia-stamouli/</link><description>Recent content in Sofia Stamouli on MillironX</description><generator>Hugo -- gohugo.io</generator><language>en-us</language><lastBuildDate>Mon, 23 Oct 2023 00:00:00 +0000</lastBuildDate><atom:link href="https://millironx.com/people/sofia-stamouli/index.xml" rel="self" type="application/rss+xml"/><item><title>nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling</title><link>https://millironx.com/academia/taxprofiler/</link><pubDate>Mon, 23 Oct 2023 00:00:00 +0000</pubDate><guid>https://millironx.com/academia/taxprofiler/</guid><description>Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline.</description></item></channel></rss> |