millironx/singularity-builds
1
0
Fork 0
mirror of https://github.com/MillironX/singularity-builds.git synced 2024-12-21 20:38:18 +00:00
Code Issues Releases Packages Activity

Give VarScan a pretty README

Browse source
This commit is contained in:
MillironX 2021-08-10 18:16:35 -05:00
parent 54f2a931f8
commit 46a55a5e9a
Signed by: millironx
GPG key ID: 139C07724802BC5D
1 changed files with 19 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

19
varscan/README.md Normal file
View file

@ -0,0 +1,19 @@
# VarScan
[![Container source](https://img.shields.io/static/v1?label=Container%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/MillironX/singularity-builds/tree/master/varscan)
[![VarScan source](https://img.shields.io/static/v1?label=VarScan%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/dkoboldt/varscan)
[![Version v2.4.4](https://img.shields.io/static/v1?label=Latest%20version&message=v2.4.4&color=yellowgreen&logo=linuxcontainers&style=flat-square)](https://cloud.sylabs.io/library/millironx/default/varscan)
[![Docs](https://img.shields.io/static/v1?label=Docs&message=gh-pages&color=blue&style=flat-square)](https://dkoboldt.github.io/varscan/)
[![Alpine base](https://img.shields.io/static/v1?label=Base%20image&message=Alpine&color=0d597f&logo=alpinelinux&style=flat-square)](https://www.alpinelinux.org/)
VarScan is a platform-independent mutation caller for targeted, exome, and whole-genome resequencing data generated on Illumina, SOLiD, Life/PGM, Roche/454, and similar instruments.
## Tools installed
### samtools
- `samtools`
### VarScan
- `varscan`