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Tweak based on official DIAMOND test-data

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This commit is contained in:
James Fellows Yates 2022-04-30 08:11:40 +02:00
parent a4a9b161d8
commit 0630fce3b5
2 changed files with 1 additions and 5 deletions
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4
conf/test.config
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@ -35,10 +35,6 @@ params {
run_metaphlan3 = true run_metaphlan3 = true
run_centrifuge = true run_centrifuge = true
run_diamond = true run_diamond = true
// TODO: setting to txt here as does not require taxonomy in database.
// Should consider re-building our test database but with the required
// taxonomy files, but this may make large files (prot2access: 9GB)
diamond_output_format = 'txt'
} }
process { process {

2
nextflow.config
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@ -111,7 +111,7 @@ params {
// diamond // diamond
run_diamond = false run_diamond = false
diamond_output_format = 'tsv' diamond_output_format = 'txt'
} }
// Load base.config by default for all pipelines // Load base.config by default for all pipelines