millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-22 11:19:54 +00:00
Code Issues Releases Packages Activity

Start work on multiQC config with distinguishing Kraken/Centrifuge

Browse source
This commit is contained in:
James Fellows Yates 2022-07-27 14:40:17 +02:00
parent a3bcf8665a
commit 25bcc0798d
1 changed files with 2 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

3
assets/multiqc_config.yml
View file

@ -47,6 +47,7 @@ top_modules:
anchor: "centrifuge" anchor: "centrifuge"
target: "Centrifuge" target: "Centrifuge"
doi: "10.1101/gr.210641.116" doi: "10.1101/gr.210641.116"
info: "Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index." info: "is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index. Note: Figure title"
extra: "Note: plot title will say Kraken2 due to Centrifuge producing the same output format as Kraken. If activated, see the actual Kraken2 results in the section above."
path_filters: path_filters:
- "*.centrifuge.txt" - "*.centrifuge.txt"