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[automated] Fix linting with Prettier
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1 changed files with 28 additions and 28 deletions
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@ -15,12 +15,12 @@ custom_logo_url: https://nf-co.re/taxprofiler
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custom_logo_title: "nf-core/taxprofiler"
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run_modules:
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- fastqc
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- adapterRemoval
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- fastp
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- bowtie2
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- kraken
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- malt
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- fastqc
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- adapterRemoval
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- fastp
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- bowtie2
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- kraken
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- malt
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#extra_fn_clean_exts:
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# - '_fastp'
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@ -28,25 +28,25 @@ run_modules:
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# - '.se.settings'
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top_modules:
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- 'fastqc':
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name: 'FastQC (pre-Trimming)'
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path_filters:
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- '*raw_*fastqc.zip'
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- 'fastp'
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- 'adapterRemoval'
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- 'fastqc':
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name: 'FastQC (post-Trimming)'
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path_filters:
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- '*raw_*processed.zip'
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- 'kraken':
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name: 'Kraken'
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path_filters:
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- '*.kraken2.report.txt'
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- 'kraken':
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name: 'Centrifuge'
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anchor: 'centrifuge'
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target: 'Centrifuge'
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doi: '10.1101/gr.210641.116'
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info: "Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index."
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path_filters:
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- '*.centrifuge.txt'
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- "fastqc":
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name: "FastQC (pre-Trimming)"
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path_filters:
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- "*raw_*fastqc.zip"
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- "fastp"
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- "adapterRemoval"
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- "fastqc":
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name: "FastQC (post-Trimming)"
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path_filters:
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- "*raw_*processed.zip"
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- "kraken":
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name: "Kraken"
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path_filters:
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- "*.kraken2.report.txt"
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- "kraken":
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name: "Centrifuge"
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anchor: "centrifuge"
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target: "Centrifuge"
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doi: "10.1101/gr.210641.116"
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info: "Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index."
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path_filters:
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- "*.centrifuge.txt"
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