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Update default values for host removal parameters
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1 changed files with 12 additions and 12 deletions
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@ -81,18 +81,18 @@ params {
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save_runmerged_reads = false
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// Host Removal
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perform_shortread_hostremoval = false
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shortread_hostremoval_reference = null
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shortread_hostremoval_index = null
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longread_hostremoval_index = null
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save_hostremoval_index = false
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save_hostremoval_mapped = false
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save_hostremoval_unmapped = false
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save_minimap2_hostremoval_index = false
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save_minimap2_hostremoval_mapped = false
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save_minimap2_hostremoval_unmapped = false
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save_samtools_unmapped_bam = false
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save_minimap2_unmapped_fq = false
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perform_shortread_hostremoval = false
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shortread_hostremoval_reference = null
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shortread_hostremoval_index = null
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save_hostremoval_index = false
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save_hostremoval_mapped = false
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save_hostremoval_unmapped = false
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longread_hostremoval_index = null
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save_minimap2_hostremoval_index = false
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save_minimap2_hostremoval_mapped = false
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save_samtools_unmapped_bam = false
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save_minimap2_unmapped_fq = false
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// MALT
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run_malt = false
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