millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-10 21:53:09 +00:00
Code Issues Releases Packages Activity

Update default values for host removal parameters

Browse source
This commit is contained in:
ljmesi 2022-05-03 11:03:48 +02:00
parent fa1c132635
commit 4b2a3789cd
1 changed files with 12 additions and 12 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

24
nextflow.config
View file

@ -81,18 +81,18 @@ params {
save_runmerged_reads = false save_runmerged_reads = false
// Host Removal // Host Removal
perform_shortread_hostremoval = false perform_shortread_hostremoval = false
shortread_hostremoval_reference = null shortread_hostremoval_reference = null
shortread_hostremoval_index = null shortread_hostremoval_index = null
longread_hostremoval_index = null save_hostremoval_index = false
save_hostremoval_index = false save_hostremoval_mapped = false
save_hostremoval_mapped = false save_hostremoval_unmapped = false
save_hostremoval_unmapped = false longread_hostremoval_index = null
save_minimap2_hostremoval_index = false save_minimap2_hostremoval_index = false
save_minimap2_hostremoval_mapped = false save_minimap2_hostremoval_mapped = false
save_minimap2_hostremoval_unmapped = false save_samtools_unmapped_bam = false
save_samtools_unmapped_bam = false save_minimap2_unmapped_fq = false
save_minimap2_unmapped_fq = false
// MALT // MALT
run_malt = false run_malt = false