1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-10 21:53:09 +00:00

Update samtools/bam2fq

This commit is contained in:
ljmesi 2022-05-05 08:38:41 +02:00
parent f4abbe280a
commit 59c7f5a5b1
2 changed files with 3 additions and 3 deletions

View file

@ -70,7 +70,7 @@
"git_sha": "f1c5384c31e985591716afdd732cf8c2ae29d05b"
},
"samtools/bam2fq": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
"git_sha": "5510ea39fe638594bc26ac34cadf4a84bf27d159"
},
"samtools/view": {
"git_sha": "6b64f9cb6c3dd3577931cc3cd032d6fb730000ce"

View file

@ -45,7 +45,7 @@ process SAMTOOLS_BAM2FQ {
bam2fq \\
$args \\
-@ $task.cpus \\
$inputbam >${prefix}_interleaved.fq.gz
$inputbam | gzip --no-name > ${prefix}_interleaved.fq.gz
cat <<-END_VERSIONS > versions.yml
"${task.process}":