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fix: set default run bracken to false

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This commit is contained in:
Moritz E. Beber 2022-10-21 10:47:51 +02:00
parent 7bd6112133
commit 60e369aa5c
2 changed files with 2 additions and 1 deletions
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1
conf/test_motus.config
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@ -33,6 +33,7 @@ params {
hostremoval_reference = 'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/homo_sapiens/genome/genome.fasta' hostremoval_reference = 'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/homo_sapiens/genome/genome.fasta'
run_kaiju = false run_kaiju = false
run_kraken2 = false run_kraken2 = false
run_bracken = false
run_malt = false run_malt = false
run_metaphlan3 = false run_metaphlan3 = false
run_centrifuge = false run_centrifuge = false

2
nextflow.config
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@ -117,7 +117,7 @@ params {
kraken2_save_minimizers = false kraken2_save_minimizers = false
// Bracken // Bracken
run_bracken = true run_bracken = false
// centrifuge // centrifuge
run_centrifuge = false run_centrifuge = false