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Re-add operator name

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This commit is contained in:
James Fellows Yates 2022-04-12 10:47:44 +02:00
parent 26399718b2
commit 8d68914192
1 changed files with 1 additions and 0 deletions
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subworkflows/local/profiling.nf
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@ -23,6 +23,7 @@ workflow PROFILING {
// e.g. output [DUMP: reads_plus_db] [['id':'2612', 'run_accession':'combined', 'instrument_platform':'ILLUMINA', 'single_end':1], <reads_path>/2612.merged.fastq.gz, ['tool':'malt', 'db_name':'mal95', 'db_params':'"-id 90"'], <db_path>/malt90]
ch_input_for_profiling = reads
.combine(databases)
.map {
meta, reads ->
def meta_new = meta.clone()
pairtype = meta_new['single_end'] ? '_se' : '_pe'