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fix: correct the input shape to metaphlan3

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This commit is contained in:
Moritz E. Beber 2022-04-02 14:44:48 +02:00
parent b0b5936fe8
commit 996b3f4912
1 changed files with 2 additions and 1 deletions
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workflows/taxprofiler.nf
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@ -168,7 +168,7 @@ workflow TAXPROFILER {
.dump(tag: "input_metaphlan3") .dump(tag: "input_metaphlan3")
.multiMap { .multiMap {
it -> it ->
reads: [it[0] + it[2], it[1][0]] reads: [it[0] + it[2], it[1]]
db: it[3] db: it[3]
} }
@ -217,6 +217,7 @@ workflow TAXPROFILER {
// TODO MALT results overwriting per database? // TODO MALT results overwriting per database?
// TODO Versions for Karken/MALT not report? // TODO Versions for Karken/MALT not report?
// TODO create multiQC module for metaphlan
MULTIQC ( MULTIQC (
ch_multiqc_files.collect() ch_multiqc_files.collect()
) )