millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-22 05:19:55 +00:00
Code Issues Releases Packages Activity

Update subworkflows/local/profiling.nf

Browse source
This commit is contained in:
James A. Fellows Yates 2022-04-18 07:31:44 +02:00 committed by GitHub
parent 9c3c8f1f4e
commit 9f634805e4
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 1 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
subworkflows/local/profiling.nf
View file

@ -87,7 +87,7 @@ workflow PROFILING {
ch_input_for_metaphlan3 = ch_input_for_profiling.metaphlan3
.filter{
if (it[0].is_fasta) log.warn "[nf-core/taxprofiler] Centrifuge currently does not accept FASTA files as input. Skipping Centrifuge for sample " + it[0].id
if (it[0].is_fasta) log.warn "[nf-core/taxprofiler] MetaPhlAn3 currently does not accept FASTA files as input. Skipping MetaPhlAn3 for sample " + it[0].id
!it[0].is_fasta
}
.multiMap {