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[automated] Fix linting with Prettier

This commit is contained in:
nf-core-bot 2022-07-26 18:47:40 +00:00
parent 65ae82efc4
commit a3bcf8665a

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@ -15,12 +15,12 @@ custom_logo_url: https://nf-co.re/taxprofiler
custom_logo_title: "nf-core/taxprofiler" custom_logo_title: "nf-core/taxprofiler"
run_modules: run_modules:
- fastqc - fastqc
- adapterRemoval - adapterRemoval
- fastp - fastp
- bowtie2 - bowtie2
- kraken - kraken
- malt - malt
#extra_fn_clean_exts: #extra_fn_clean_exts:
# - '_fastp' # - '_fastp'
@ -28,25 +28,25 @@ run_modules:
# - '.se.settings' # - '.se.settings'
top_modules: top_modules:
- 'fastqc': - "fastqc":
name: 'FastQC (pre-Trimming)' name: "FastQC (pre-Trimming)"
path_filters: path_filters:
- '*raw_*fastqc.zip' - "*raw_*fastqc.zip"
- 'fastp' - "fastp"
- 'adapterRemoval' - "adapterRemoval"
- 'fastqc': - "fastqc":
name: 'FastQC (post-Trimming)' name: "FastQC (post-Trimming)"
path_filters: path_filters:
- '*raw_*processed.zip' - "*raw_*processed.zip"
- 'kraken': - "kraken":
name: 'Kraken' name: "Kraken"
path_filters: path_filters:
- '*.kraken2.report.txt' - "*.kraken2.report.txt"
- 'kraken': - "kraken":
name: 'Centrifuge' name: "Centrifuge"
anchor: 'centrifuge' anchor: "centrifuge"
target: 'Centrifuge' target: "Centrifuge"
doi: '10.1101/gr.210641.116' doi: "10.1101/gr.210641.116"
info: "Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index." info: "Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index."
path_filters: path_filters:
- '*.centrifuge.txt' - "*.centrifuge.txt"