millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-10 21:03:09 +00:00
Code Issues Releases Packages Activity

Fix parameter name

Browse source
This commit is contained in:
James Fellows Yates 2022-11-03 14:58:03 +01:00
parent c03a21c770
commit c5e5696f84
2 changed files with 2 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
nextflow.config
View file

@ -120,7 +120,7 @@ params {
//krakenuniq
run_krakenuniq = false
krakenuniq_ram_run_size = '16G'
krakenuniq_ram_chunk_size = '16G'
krakenuniq_save_reads = false // added directly to module in profiling.nf
krakenuniq_save_readclassifications = false // added directly to module in profiling.nf

2
nextflow_schema.json
View file

@ -399,7 +399,7 @@
"description": "Turn on saving of KrakenUniq-aligned reads",
"help_text": "Save reads that do and do not have a taxonomic classification in your output results directory in FASTQ format.\n\n> Modifies tool parameter(s):\n> - krakenuniq: `--classified-out` and `--unclassified-out`"
},
"krakenuniq_ram_run_size": {
"krakenuniq_ram_chunk_size": {
"type": "string",
"default": "16G",
"description": "Specify how large to chunk database when loading into memory for KrakenUniq",