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## Introduction
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## Introduction
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> ⚠️ This pipeline is still under development! While the pipeline is usable, not all functionality will be available!
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<!-- TODO nf-core: Write a 1-2 sentence summary of what data the pipeline is for and what it does -->
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<!-- TODO nf-core: Write a 1-2 sentence summary of what data the pipeline is for and what it does -->
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**nf-core/taxprofiler** is a bioinformatics best-practice analysis pipeline for taxonomic profiling of shotgun metagenomic data. It allows for in-parallel profiling with multiple profiling tools against multiple databases, produces standardised output tables.
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**nf-core/taxprofiler** is a bioinformatics best-practice analysis pipeline for taxonomic profiling of shotgun metagenomic data. It allows for in-parallel profiling with multiple profiling tools against multiple databases, produces standardised output tables.
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