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Final MQC fix for AR2 (remove too-early collect)

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James Fellows Yates 2022-04-03 07:28:01 +02:00
parent 02d950c58c
commit d3572e1878
1 changed files with 1 additions and 1 deletions
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2
subworkflows/local/shortread_adapterremoval.nf
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@ -77,7 +77,7 @@ workflow SHORTREAD_ADAPTERREMOVAL {
ch_versions = ch_versions.mix( ADAPTERREMOVAL_SINGLE.out.versions.first() )
ch_versions = ch_versions.mix( ADAPTERREMOVAL_PAIRED.out.versions.first() )
ch_multiqc_files = ch_multiqc_files.mix( ADAPTERREMOVAL_PAIRED.out.log.collect{it[1]}, ADAPTERREMOVAL_SINGLE.out.log.collect{it[1]} )
ch_multiqc_files = ch_multiqc_files.mix( ADAPTERREMOVAL_PAIRED.out.log, ADAPTERREMOVAL_SINGLE.out.log )
emit:
reads = ch_processed_reads // channel: [ val(meta), [ reads ] ]