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Update gunzip
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parent
2e980f1d15
commit
dfb2e02eb3
3 changed files with 20 additions and 19 deletions
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@ -83,7 +83,7 @@
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},
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"gunzip": {
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"branch": "master",
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"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
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"git_sha": "b9829e1064382745d8dff7f1d74d2138d2864f71",
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"installed_by": ["modules"]
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},
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"kaiju/kaiju": {
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2
modules/nf-core/gunzip/main.nf
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2
modules/nf-core/gunzip/main.nf
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@ -5,7 +5,7 @@ process GUNZIP {
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conda "conda-forge::sed=4.7"
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container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
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'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
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'ubuntu:20.04' }"
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'docker.io/ubuntu:20.04' }"
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input:
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tuple val(meta), path(archive)
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35
modules/nf-core/gunzip/meta.yml
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35
modules/nf-core/gunzip/meta.yml
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@ -3,31 +3,32 @@ description: Compresses and decompresses files.
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keywords:
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- gunzip
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- compression
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- decompression
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tools:
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- gunzip:
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description: |
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gzip is a file format and a software application used for file compression and decompression.
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documentation: https://www.gnu.org/software/gzip/manual/gzip.html
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licence: ["GPL-3.0-or-later"]
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description: |
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gzip is a file format and a software application used for file compression and decompression.
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documentation: https://www.gnu.org/software/gzip/manual/gzip.html
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licence: ["GPL-3.0-or-later"]
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input:
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- meta:
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type: map
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description: |
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Optional groovy Map containing meta information
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e.g. [ id:'test', single_end:false ]
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type: map
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description: |
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Optional groovy Map containing meta information
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e.g. [ id:'test', single_end:false ]
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- archive:
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type: file
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description: File to be compressed/uncompressed
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pattern: "*.*"
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type: file
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description: File to be compressed/uncompressed
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pattern: "*.*"
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output:
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- gunzip:
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type: file
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description: Compressed/uncompressed file
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pattern: "*.*"
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type: file
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description: Compressed/uncompressed file
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pattern: "*.*"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@joseespinosa"
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- "@drpatelh"
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