James Fellows Yates
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7ce55a99e8
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Fix linting
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1 year ago |
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James Fellows Yates
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656956b0f9
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Black formatting
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1 year ago |
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James A. Fellows Yates
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41063bc670
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Apply suggestions from code review
Co-authored-by: Moritz E. Beber <midnighter@posteo.net>
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1 year ago |
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James Fellows Yates
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11db981a88
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minor fixes
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1 year ago |
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James Fellows Yates
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4b68e95770
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Revert PEP validation back to python samplesheet check
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1 year ago |
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James Fellows Yates
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43a8aa4405
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Remove detect_reads.py and replace remaining checks with nextflow code instead
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2 years ago |
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Rafal Stepien
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5f3eee9a4a
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Add working version of PEP-nf-core integration
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2 years ago |
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James Fellows Yates
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3a33d81e80
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Black linting I hope
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2 years ago |
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James Fellows Yates
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8fe7f8bf4b
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Revert "Fix final linting problems for template merge"
This reverts commit e64b3f85a4.
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2 years ago |
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James A. Fellows Yates
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e64b3f85a4
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Fix final linting problems for template merge
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2 years ago |
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James A. Fellows Yates
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8fff741f85
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Merge branch 'dev' into nf-core-template-merge-2.5.1
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2 years ago |
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nf-core-bot
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28045430d1
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Template update for nf-core/tools version 2.5.1
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2 years ago |
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James A. Fellows Yates
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28d8d3f8fb
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Merge branch 'dev' into nf-core-template-merge-2.5
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2 years ago |
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nf-core-bot
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6dfca81761
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Template update for nf-core/tools version 2.5
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2 years ago |
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James A. Fellows Yates
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1821496a49
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Merge pull request #90 from nf-core/samplesheet-check-improvement
Make check_samplesheet.py compatible with nf-core/fetchngs
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2 years ago |
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James A. Fellows Yates
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4315141c5f
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Update bin/check_samplesheet.py
Co-authored-by: Moritz E. Beber <midnighter@posteo.net>
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2 years ago |
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James A. Fellows Yates
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2e7f26f380
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Replace header tuple with sub-set list of only relevant columns for sample checking
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2 years ago |
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James Fellows Yates
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c1a7d6335f
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Do not require fixed column order
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2 years ago |
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James Fellows Yates
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ec13b8d608
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Remove support for uncompressed FASTQ files
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2 years ago |
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nf-core-bot
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a560492353
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Template update for nf-core/tools version 2.4
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2 years ago |
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ljmesi
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7f7ddc9f14
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Update comment
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2 years ago |
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James A. Fellows Yates
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ac77676d2b
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Merge branch 'dev' into nf-core-template-merge-2.3
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2 years ago |
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nf-core-bot
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699d26b149
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Template update for nf-core/tools version 2.3
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2 years ago |
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maxibor
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1b893cb039
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add check for fastq with fasta
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2 years ago |
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maxibor
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a6cfa0a1ba
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cleanup
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2 years ago |
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maxibor
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54a1a4fd45
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update samplesheet specs
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2 years ago |
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maxibor
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f867c057a4
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add more columns to samplesheet
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2 years ago |
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James Fellows Yates
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12e7b428f2
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initial template build from nf-core/tools, version 2.2
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2 years ago |