James A. Fellows Yates
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2fc6f8e3bf
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Merge pull request #296 from nf-core/post-patch-update
Post patch update
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12 months ago |
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James A. Fellows Yates
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ea76a97d99
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Merge branch 'dev' into post-patch-update
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12 months ago |
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James Fellows Yates
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2263d96e73
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Merge remote-tracking branch 'origin/master' into post-patch-update
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12 months ago |
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James A. Fellows Yates
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07b926a89e
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Merge pull request #294 from nf-core/patch
Patch release 1.0.1
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12 months ago |
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James A. Fellows Yates
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8ff8ab8b70
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Update CHANGELOG.md
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12 months ago |
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James Fellows Yates
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5d95151f54
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Fix staging
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1 year ago |
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James A. Fellows Yates
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e8b85d0b62
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Update nextflow.config
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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James Fellows Yates
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c0897ecc78
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Bump version to 1.0.1
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1 year ago |
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James Fellows Yates
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982fba1b58
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Fix taxpasta not receiving taxonomy directory
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1 year ago |
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James A. Fellows Yates
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93fd168b4f
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Merge pull request #289 from nf-core/nf-core-template-merge-2.8
Important! Template update for nf-core/tools v2.8
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1 year ago |
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James Fellows Yates
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3a45c45101
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Fix versions of other non-standard containers
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1 year ago |
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James Fellows Yates
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dfb2e02eb3
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Update gunzip
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1 year ago |
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James Fellows Yates
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2e980f1d15
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Update CAT_FASTQ module
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1 year ago |
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James Fellows Yates
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87fd5f72d0
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Fix template
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1 year ago |
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James Fellows Yates
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661cfbe012
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Update UNTAR module
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1 year ago |
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James A. Fellows Yates
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727291999b
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Merge branch 'dev' into nf-core-template-merge-2.8
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1 year ago |
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James A. Fellows Yates
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89096beb61
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Merge pull request #290 from nf-core/motus-docs-improvements
Improve mOTUS database input description
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1 year ago |
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James Fellows Yates
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f11d7c7bb5
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Comment out right part of function
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1 year ago |
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James Fellows Yates
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2dc8a88b67
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Update changelog
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1 year ago |
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James Fellows Yates
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44286bf96d
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Improve mOTUS database input desciption
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1 year ago |
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James Fellows Yates
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8bc17cccfc
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Prettier
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1 year ago |
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James Fellows Yates
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1ef8119c59
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Linting fixes deactivate accidental re-included function
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1 year ago |
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James A. Fellows Yates
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bca6e645a8
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Merge branch 'dev' into nf-core-template-merge-2.8
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1 year ago |
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nf-core-bot
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ac60d66956
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Template update for nf-core/tools version 2.8
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1 year ago |
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James A. Fellows Yates
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9850bdf1fa
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Merge pull request #287 from nf-core/missing-changelog
Misssing changelog manual prettier [skip ci]
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1 year ago |
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James A. Fellows Yates
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4f08b3697f
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Merge branch 'dev' into missing-changelog
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1 year ago |
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Moritz E. Beber
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c4ad03ff9f
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Merge pull request #276 from nf-core/feat-batch
feat: introduce sample batches for krakenuniq
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1 year ago |
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Moritz E. Beber
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66a166dbdc
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docs: tweak parameter schema description
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1 year ago |
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Moritz E. Beber
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08f06b9982
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Apply suggestions from code review
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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1 year ago |
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Moritz E. Beber
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49086d9475
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docs: add changelog entry
[skip ci]
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1 year ago |
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Moritz E. Beber
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2725fe15a9
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docs: create a schema entry for the new parameter
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1 year ago |
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Moritz E. Beber
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17a9493e6d
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fix: remove typo
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1 year ago |
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Moritz E. Beber
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70dd7cade9
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feat: introduce sample batches for krakenuniq
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1 year ago |
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James A. Fellows Yates
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b299a25bc7
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Merge pull request #286 from nf-core/multiqc-optimisations
MultiQC Optimisations
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1 year ago |
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James A. Fellows Yates
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9fa458f381
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Merge pull request #279 from nf-core/manifest-update
Reduce authors to main + other contributors
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1 year ago |
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James A. Fellows Yates
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2140928638
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Merge pull request #272 from nf-core/final-reads-saving
Add 'final reads for profiling' saving mechanism
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1 year ago |
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James A. Fellows Yates
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ee76a5f38b
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Update conf/modules.config
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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James Fellows Yates
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e000ac3038
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Misssing changelog manual prettier [skip ci]
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1 year ago |
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James A. Fellows Yates
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5a09319fb3
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Merge branch 'dev' into multiqc-optimisations
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1 year ago |
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James A. Fellows Yates
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003862d9ea
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Merge pull request #285 from nf-core/update-kraken
BUmp Kraken2 nf-core module to prevent huge logs
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1 year ago |
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James A. Fellows Yates
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c3c91780ab
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Merge pull request #280 from nf-core/replace-exit-with-error
Replace all instance of exit 1 with error for safety and consistency
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1 year ago |
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nf-core-bot
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386b1c9dfd
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[automated] Fix linting with Prettier
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1 year ago |
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James A. Fellows Yates
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d06ac3713d
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Update README.md
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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James Fellows Yates
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59f31469c3
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Update CHANGELOG
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1 year ago |
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James Fellows Yates
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1eb951715f
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MultiQC optimisations for DIAMOND and Falco
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1 year ago |
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James Fellows Yates
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0ed110c529
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BUmp Kraken2 nf-core module to prevent huge logs
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1 year ago |
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nf-core-bot
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4f7e2eed8c
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[automated] Fix linting with Prettier
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1 year ago |
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James Fellows Yates
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31e3c21dcb
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Make all saveAs conditions consistent
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1 year ago |
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James A. Fellows Yates
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f476b49d29
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Add team sectionb
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1 year ago |
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James Fellows Yates
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5d90c775e9
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Logic safety!
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1 year ago |