James A. Fellows Yates
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6c2ce4a1c9
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Apply suggestions from code review
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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James A. Fellows Yates
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70eb84b8d5
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Apply suggestions from code review
Co-authored-by: Moritz E. Beber <midnighter@posteo.net>
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1 year ago |
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James Fellows Yates
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b3837cce5b
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Relax strictness so can supply empty db_params but block if only single parameter with out ;
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1 year ago |
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James Fellows Yates
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18886c0cbc
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Start trying a different method with maps in profiling
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1 year ago |
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Sofia Stamouli
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ffc884b542
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Merge branch 'nf-core:dev' into documentation
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1 year ago |
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James A. Fellows Yates
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b4f88a29ce
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Update docs/usage.md [skip ci]
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1 year ago |
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James A. Fellows Yates
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11a8624b39
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Add warning about database parameters [skip ci]
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1 year ago |
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sofstam
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5363274867
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Add some last documentation
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1 year ago |
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sofstam
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366745bdbe
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Prettier in usage
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1 year ago |
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Sofia Stamouli
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5d12785ca4
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Merge branch 'nf-core:dev' into update_output
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1 year ago |
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James A. Fellows Yates
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9cf2d8763f
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[skip ci] Update docs/usage.md
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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James Fellows Yates
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085d9e519c
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[skip ci] add comment about recommendation to split SR/LR
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1 year ago |
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Sofia Stamouli
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7d4035d4c7
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Add new line in the description of custom file
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1 year ago |
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James A. Fellows Yates
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36629b3dde
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Merge branch 'dev' into post-usage-draft-tweaks
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1 year ago |
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James A. Fellows Yates
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6e43695264
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Apply suggestions from code review
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
|
1 year ago |
|
James A. Fellows Yates
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6d380fbbff
|
Apply suggestions from code review
Co-authored-by: Sofia Stamouli <91951607+sofstam@users.noreply.github.com>
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1 year ago |
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Sofia Stamouli
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4dcf8c0b02
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Prettier
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1 year ago |
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sofstam
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024b683671
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Update output and usage
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1 year ago |
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James Fellows Yates
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33d4a84237
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Add explicit sentnece about classification/profiling
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1 year ago |
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nf-core-bot
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11400b016c
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[automated] Fix linting with Prettier
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1 year ago |
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James A. Fellows Yates
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b34a021db7
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Specify the difference between classification/profiling
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1 year ago |
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James Fellows Yates
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ab0c62bdc1
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Post-release tweaks to usage.md
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1 year ago |
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Sofia Stamouli
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ec9c7cfedc
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Prettier
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1 year ago |
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Sofia Stamouli
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2f291731c1
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Merge branch 'nf-core:dev' into update_usage
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1 year ago |
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Sofia Stamouli
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1eeb3b337a
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Update usage.md
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1 year ago |
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Sofia Stamouli
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29978d83b9
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Update centrifuge section
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1 year ago |
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Sofia Stamouli
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d6e0d404e3
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Update docs/usage.md
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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1 year ago |
|
Sofia Stamouli
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ba43b0daa4
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Update docs/usage.md
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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1 year ago |
|
Sofia Stamouli
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7be3cfc450
|
Review suggestions
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1 year ago |
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James Fellows Yates
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11db981a88
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minor fixes
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1 year ago |
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Sofia Stamouli
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644c4ab831
|
Review suggestions
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1 year ago |
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Sofia Stamouli
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3282f5944b
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Apply prettier
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1 year ago |
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sofstam
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d99706f43d
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Move database section and alphabetical order
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1 year ago |
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Sofia Stamouli
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f80adee9e2
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Review suggestions and prettier
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1 year ago |
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Sofia Stamouli
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1eb3da758b
|
Apply review suggestion
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
|
1 year ago |
|
Sofia Stamouli
|
97e48075c8
|
Apply review suggestion
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
|
1 year ago |
|
Sofia Stamouli
|
a99f89af77
|
Apply review suggestions
|
1 year ago |
|
Sofia Stamouli
|
bd5cd0a897
|
Prettier
|
1 year ago |
|
sofstam
|
896a39e68d
|
Apply review suggestions
|
1 year ago |
|
James Fellows Yates
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4b68e95770
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Revert PEP validation back to python samplesheet check
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1 year ago |
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Sofia Stamouli
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98f3ab9fd1
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Apply prettier
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2 years ago |
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Sofia Stamouli
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a622dcaef0
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Delete one line
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2 years ago |
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sofstam
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5373c58331
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Merge branch 'dev' into update_usage
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2 years ago |
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sofstam
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97fbc2bceb
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Update usage.md
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2 years ago |
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sofstam
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3af71d9c63
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Merge branch 'dev' into update_usage
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2 years ago |
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James Fellows Yates
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1ccd0a0767
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Merge branch 'dev' into nf-core-template-merge-2.7.1
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2 years ago |
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nf-core-bot
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36f3b5723b
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Template update for nf-core/tools version 2.7.1
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2 years ago |
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Moritz E. Beber
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4529e7e545
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refactor: change parameter exclude unmerged to include
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2 years ago |
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James Fellows Yates
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de74e4f727
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Fix centrifuge warning, filter out long reads from Brakcen, add some caveat docs to usage.md
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2 years ago |
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James Fellows Yates
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6459d8920f
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Linting!
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2 years ago |