millironx/taxprofiler
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taxprofiler/subworkflows/local
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James A. Fellows Yates 9d2be68fb8 Merge branch 'dev' into centrifuge_mqc
2022-07-26 18:01:30 +00:00
..
db_check.nf remove the database auto-download for mOTUs. 2022-06-03 14:13:58 -04:00
input_check.nf Update input_check.nf 2022-04-18 07:35:19 +02:00
longread_hostremoval.nf Implement hostremoval 2022-05-03 09:34:27 +02:00
longread_preprocessing.nf Update longread_preprocessing.nf 2022-07-19 16:44:08 +02:00
profiling.nf Merge branch 'dev' into centrifuge_mqc 2022-07-26 18:01:30 +00:00
shortread_adapterremoval.nf Add initial longread QC filtering - requires filtlong module update 2022-05-01 07:18:14 +02:00
shortread_complexityfiltering.nf Add FASTP complexity option 2022-05-07 06:09:05 +02:00
shortread_fastp.nf Add initial longread QC filtering - requires filtlong module update 2022-05-01 07:18:14 +02:00
shortread_hostremoval.nf Remove flagstat as bowtie2 reports this itself 2022-04-03 17:23:14 +02:00
shortread_preprocessing.nf Add initial longread QC filtering - requires filtlong module update 2022-05-01 07:18:14 +02:00
standardisation_profiles.nf Add motus/merge and biom support 2022-07-12 11:39:26 +02:00
visualization_krona.nf Add motus/merge and biom support 2022-07-12 11:39:26 +02:00