mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-14 06:33:08 +00:00
160 lines
7 KiB
JSON
160 lines
7 KiB
JSON
{
|
|
"name": "nf-core/taxprofiler",
|
|
"homePage": "https://github.com/nf-core/taxprofiler",
|
|
"repos": {
|
|
"https://github.com/nf-core/modules.git": {
|
|
"modules": {
|
|
"nf-core": {
|
|
"adapterremoval": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"bbmap/bbduk": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"bowtie2/align": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"bowtie2/build": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"cat/fastq": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"centrifuge/centrifuge": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"centrifuge/kreport": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"custom/dumpsoftwareversions": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"diamond/blastx": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"eido/convert": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"eido/validate": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"fastp": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"fastqc": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"filtlong": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"gunzip": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"kaiju/kaiju": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"kaiju/kaiju2krona": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"kaiju/kaiju2table": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"kraken2/kraken2": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"krakentools/combinekreports": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"krakentools/kreport2krona": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"krona/ktimporttaxonomy": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"krona/ktimporttext": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"malt/run": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"megan/rma2info": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"metaphlan3/mergemetaphlantables": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"metaphlan3/metaphlan3": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"minimap2/align": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"minimap2/index": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"motus/merge": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"motus/profile": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"multiqc": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"porechop": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"prinseqplusplus": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"samtools/bam2fq": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"samtools/view": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
},
|
|
"untar": {
|
|
"branch": "master",
|
|
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905"
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|